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Best Omega-3 Supplements for Perimenopause: EPA, DHA, Forms and Quality

Compare the best omega-3 supplements for perimenopause. EPA vs DHA for mood and cognition, fish oil vs algae, triglyceride vs ethyl ester form and dosing explained.

6 min readFebruary 28, 2026

Why Omega-3 Matters in Perimenopause

Omega-3 fatty acids are long-chain polyunsaturated fats that your body cannot synthesise in sufficient quantities and must obtain from food or supplements. During perimenopause, several changes increase the demand for omega-3. Oestrogen decline is associated with increased systemic inflammation, and omega-3 fatty acids, specifically EPA and DHA, are among the most well-evidenced anti-inflammatory nutrients available. Cardiovascular risk rises during the menopause transition, and omega-3 supplementation has a substantial evidence base for supporting heart health including triglyceride reduction and blood pressure support. Joint pain, brain fog, and low mood are all symptoms that omega-3 has been studied for specifically in midlife women. For women who do not eat oily fish two to three times per week, a quality omega-3 supplement is one of the highest-priority additions to a perimenopause supplement stack.

EPA vs DHA: Different Benefits for Different Symptoms

EPA (eicosapentaenoic acid) and DHA (docosahexaenoic acid) are the two primary omega-3 fatty acids in fish oil, and they do not have identical effects. EPA is the more anti-inflammatory fraction and has the stronger evidence base for mood disorders. Studies on depression and anxiety in midlife women have used EPA-predominant supplements, typically at doses of 1,000 to 2,000mg of EPA per day. If low mood, anxiety, or irritability are your primary symptoms, look for a supplement with a higher EPA-to-DHA ratio, ideally 2:1 or higher. DHA is the primary structural fat in brain tissue and the retina, and is more important for long-term cognitive health and visual function. For brain fog and cognitive symptoms, a balanced or DHA-predominant supplement makes more sense. Many quality products offer a 2:1 EPA:DHA ratio that covers both targets reasonably well.

Fish Oil vs Algae-Based Omega-3

Fish oil is the most common omega-3 supplement and provides EPA and DHA directly. Algae-based omega-3 is derived from the same microalgae that fish eat (fish are not actually natural producers of omega-3, they concentrate it from algae in the food chain). Algae-based supplements are vegan, sustainable, and do not carry the risk of fish-sourced contaminants. The DHA content of algae supplements is well established and comparable to fish oil. EPA content from algae has historically been lower, though more recent algae oil products have improved EPA concentrations significantly. For women who do not consume fish for ethical, religious, or taste reasons, algae-based omega-3 is a scientifically sound alternative. Brands like Nordic Naturals, Testa, and Igennus offer high-quality algae options.

Triglyceride vs Ethyl Ester Form

This is one of the most overlooked quality factors in omega-3 supplementation. Fish oil is processed in two main forms: natural triglyceride (TG) and ethyl ester (EE). In TG form, EPA and DHA are attached to a glycerol backbone as they occur naturally in fish tissue. In EE form, the fatty acids are attached to ethanol molecules, which is a result of the molecular distillation and concentration process. The bioavailability of TG-form fish oil is significantly higher than EE form, with some studies showing 50 to 70 percent better absorption when taken with food. Most budget fish oil supplements are in ethyl ester form. Look for the words natural fish oil, re-esterified triglyceride (rTG), or TG on the label, or check with the manufacturer. Higher-quality brands including Nordic Naturals, Carlson, and Bare Biology use TG or rTG form.

Rancidity and Freshness

Omega-3 fatty acids are highly prone to oxidation, which means fish oil can go rancid. Rancid fish oil smells strongly fishy or paint-like and contains oxidation products that may be pro-inflammatory rather than anti-inflammatory, potentially reversing the benefit of supplementation. The standard measure of fish oil oxidation is the TOTOX score, which combines two measures of oxidative degradation. A fresh, high-quality fish oil should have a TOTOX score below 26. Some manufacturers publish their TOTOX values or certificates of analysis on request. A simple home test is to bite open a capsule: fresh fish oil should smell mild, like the ocean, not pungent. Strong fish burps after taking a supplement are often a sign of rancidity or poor-quality oil. Refrigerating fish oil after opening significantly slows oxidation and extends freshness.

Dosing and Sustainability

Most research on the benefits of omega-3 for mood, inflammation, and cardiovascular health uses doses of 1,000 to 3,000mg of combined EPA and DHA per day. This is higher than the dose you get from a standard one-a-day fish oil capsule, which typically contains only 300mg of EPA and DHA despite the total capsule weight being 1,000mg. Read the label carefully and look at the EPA plus DHA figure, not the total fish oil weight. For perimenopause specifically, aiming for at least 1,000mg of combined EPA and DHA daily is a reasonable minimum, with higher doses if mood or inflammation is a significant concern. From a sustainability standpoint, look for MSC (Marine Stewardship Council) certification, which indicates the fish were sourced from sustainable fisheries. Algae-based options are the most sustainable choice of all.

Best Omega-3 Supplements to Consider

For overall quality and transparency, Nordic Naturals Ultimate Omega is consistently highly rated. It comes in TG form, publishes its TOTOX scores, and is third-party tested. Bare Biology Lion Heart (UK) is a high-potency liquid fish oil in TG form with a verifiable supply chain and strong independent reviews. Igennus Super EPA is a UK brand offering an EPA-predominant formula in rTG form that is well suited to mood and anxiety support. For algae-based options, Nordic Naturals Algae Omega and Testa Omega-3 are the strongest performers. When tracking your symptom response to a new omega-3 supplement, log consistently for at least six to eight weeks before evaluating, as the benefits of omega-3 accumulate over time rather than appearing immediately. PeriPlan lets you log symptoms and track patterns over time, which makes it straightforward to assess whether a supplement change is correlated with symptom improvement.

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Medical disclaimerThis content is for informational purposes only and does not constitute medical advice, diagnosis, or treatment. Always consult a qualified healthcare provider with questions about a medical condition. PeriPlan is not a substitute for professional medical advice. If you are experiencing severe or concerning symptoms, please contact your doctor or emergency services immediately.

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