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Bioidentical Hormones: What They Are, What's Marketing, and What the Science Says

Confused by bioidentical hormones? Learn the real difference between FDA-approved options and compounded formulas, and what the research actually supports.

8 min readFebruary 27, 2026

A Term That Means Different Things to Different People

You have probably seen "bioidentical hormones" mentioned in wellness circles, on pharmacy websites, and perhaps from a friend who swears by her custom compound. The term sounds scientific and reassuring. But it is also used in ways that blur important distinctions.

Bioidentical is a chemistry term, not a regulatory category. It means the hormone molecule is structurally identical to the hormone your body produces naturally. That is a meaningful thing. What it does not tell you is where the hormone came from, whether it was tested for safety and efficacy in clinical trials, or whether the dose you are getting is what the label says.

The confusion arises because the word is used to describe two completely different categories of products. One category is FDA-approved medications. The other is compounded formulations sold through specialty pharmacies. These are not interchangeable, and the distinction matters for your safety.

What Bioidentical Actually Means Chemically

Your body makes several estrogens: estradiol, estrone, and estriol. It makes progesterone. It makes testosterone. When a pharmaceutical company creates a hormone molecule that is identical in structure to one your body makes, that molecule is bioidentical by definition.

Estradiol, the primary estrogen in most FDA-approved hormone therapies, is bioidentical to the estradiol your ovaries produce. Micronized progesterone, sold under the brand name Prometrium in the US, is bioidentical to the progesterone your body makes. These are available at your standard pharmacy, covered by most insurance plans, and have been studied extensively in clinical trials.

So the first thing to understand is this: bioidentical hormones are already widely available through conventional medicine. You do not need to go to a specialty compounding pharmacy to get them. The marketing around custom compounded bioidenticals has created the impression that only compounding pharmacies offer "true" bioidenticals, which is simply not accurate.

The Two Categories: FDA-Approved vs. Compounded

FDA-approved bioidentical hormone therapies include estradiol patches, gels, sprays, and pills, as well as vaginal estrogen products and micronized progesterone capsules. These went through rigorous clinical trials. The FDA reviewed their safety, efficacy, and manufacturing standards. Each batch is tested for consistency. What is on the label is what is in the product.

Compounded bioidentical hormones are a different category. A compounding pharmacy creates a custom preparation based on a prescription, often after a provider orders a panel of hormone tests and creates a personalized formula. These products have not gone through FDA clinical trials. They are not reviewed for efficacy. Manufacturing consistency varies by pharmacy.

The FDA has raised concerns about compounded hormones on multiple occasions. Studies have found that compounded preparations sometimes contain different amounts of the hormone than prescribed, either more or less. You cannot verify what you are getting the way you can with a regulated product.

The Compounding Appeal: Why People Choose It

Custom compounding has real appeal, and it is worth understanding why people pursue it. Some women have sensitivities to inactive ingredients in standard products. Some need a dose that is not commercially available. Some cannot tolerate oral progesterone and need an alternative delivery method. In these specific situations, compounding can serve a legitimate purpose.

Compounding is also appealing because it feels personalized. A provider orders your hormone panel, creates a formula just for you, and you receive a cream or capsule tailored to your levels. This feels more sophisticated than a standard prescription. The experience is part of what people are paying for.

But personalization based on saliva or serum hormone levels during perimenopause is not well-supported by evidence. Hormone levels fluctuate dramatically day to day and hour to hour during perimenopause. A test on Tuesday morning does not tell you what your levels will be on Friday afternoon. Dosing to "optimize" numbers rather than to treat symptoms is a methodology that lacks strong clinical backing.

The Compounding Pharmacy Problem

Here is what the Menopause Society (formerly NAMS) and other major medical organizations have consistently said: compounded hormones should not be used as a first-line therapy when FDA-approved alternatives exist. They are appropriate in specific circumstances where standard products genuinely cannot meet a patient's needs.

The problems with compounding are not theoretical. Quality control varies widely between pharmacies. There is no standardization requirement equivalent to pharmaceutical manufacturing. One pharmacy's 2 mg progesterone cream may deliver a very different dose than another's. Testing of compounded products by independent labs has found meaningful inconsistencies.

Additionally, because compounded products are not studied in trials, the safety data from pharmaceutical estrogen and progesterone research does not automatically apply. You may be taking something chemically similar to a studied product, but at a dose or in a combination that has not been evaluated for safety over time.

None of this makes compounding inherently dangerous in all cases. It means the risks are less well-characterized, and it means you should approach it with eyes open rather than assuming custom equals better.

What About Tri-Est and Bi-Est Formulas?

You may have heard of Bi-Est or Tri-Est, compounded combinations of multiple estrogens, typically estradiol with estriol, or estradiol with estriol and estrone. Proponents argue that combining estrogens mirrors the body's natural ratio more closely.

There is no clinical trial evidence that these combinations are more effective or safer than estradiol alone. Estriol, the weakest of the three estrogens, is not FDA-approved as a standalone hormone therapy in the US. Tri-Est and Bi-Est have not been tested head-to-head against standard estradiol in randomized controlled trials.

The claim that these formulas are safer because they are "more natural" is a marketing argument, not a scientific one. The most extensively studied and well-characterized estrogen for women in perimenopause and menopause is estradiol. That is not a coincidence. It is the result of decades of research.

Saliva Testing and the Personalization Pitch

Many practices offering custom bioidentical hormone therapy use saliva testing to assess hormone levels. The argument is that saliva reflects the "free" or active fraction of hormones more accurately than blood. This sounds plausible. The evidence, however, does not support saliva testing as a reliable or reproducible method for guiding hormone dosing.

Saliva hormone levels are influenced by what you have eaten, whether you have brushed your teeth, the time of day, whether you have touched any topical hormone products, and many other variables. Reference ranges for saliva are poorly standardized across labs. Major medical societies do not recommend saliva testing for this purpose.

Blood testing has its own limitations in perimenopause, particularly for FSH and estradiol, which fluctuate so much that a single result tells you little. But the solution is not to switch to a less reliable test. It is to diagnose and treat perimenopause based on symptoms, not numbers, which is exactly what current evidence-based guidelines recommend.

When Compounding Is Actually Appropriate

To be fair, there are situations where compounded hormones serve a genuine purpose that FDA-approved products cannot meet. If a patient has a verified allergy to a specific inactive ingredient in every available commercial product, compounding may be the solution. If a dose that is clinically indicated is not commercially available, compounding can fill that gap.

Transdermal testosterone for women is one area where compounding is often necessary. FDA-approved testosterone products for women do not exist in the US. The evidence for testosterone in women with low libido and documented low levels is reasonably solid, and getting it often requires a compounded cream or gel at a woman-appropriate dose. This is a legitimate use case.

The key question is whether you are compounding because no appropriate alternative exists, or because someone has persuaded you that custom is superior to standard. One is a medical decision. The other is a marketing outcome.

How to Navigate This If You Are Considering Bioidenticals

Start with FDA-approved options. Estradiol patches, gels, or sprays combined with micronized progesterone cover the needs of most women in perimenopause. These are bioidentical, well-studied, generally covered by insurance, and available at any pharmacy.

If a provider recommends jumping straight to custom compounding without discussing standard options, ask why. What specific need cannot be met by an FDA-approved product? A good provider will have a clear answer.

If you are already using compounded hormones and feel good, that is valuable information. Work with your provider to ensure you are being monitored appropriately. Consider whether a transition to a regulated product with equivalent hormones might offer more consistency.

Tracking your symptoms, as you can do in PeriPlan, is more useful for guiding hormone therapy decisions than chasing hormone numbers. How you feel, and how consistently you feel that way, is the data that matters most.

Questions to Ask Any Provider Recommending Compounded Hormones

If a provider recommends compounded hormones for you, you are entitled to ask specific questions before agreeing. Good providers will welcome these questions. Others may not, and that reaction is informative.

Ask: Is there an FDA-approved product that could meet my needs? If so, why are you recommending compounding instead? Which compounding pharmacy do you use, and what do you know about their quality control practices? How will we monitor whether this formulation is working and whether my dose is appropriate?

Also ask: What testing will we use to guide dosing, and what is the evidence that this type of testing reliably predicts how I will feel? Are there any interactions between this formulation and my other medications?

A provider who cannot answer these questions clearly, or who becomes defensive when you ask them, may not be operating from an evidence-based foundation. The goal of these questions is not to challenge your provider. It is to ensure you have the information you need to make an informed decision.

Remember that marketing in the bioidentical hormone space is sophisticated and emotionally resonant. The appeal to natural, personalized, and holistic language is effective precisely because it speaks to real desires women have. Your desire for care that feels tailored to you is completely valid. The question is whether the specific product or approach actually delivers on that promise.

The Cost Difference Worth Knowing About

Compounded hormone preparations are typically not covered by insurance. You pay out of pocket, and the cost varies significantly by pharmacy and formulation. A monthly supply of a compounded cream or capsule might run from $50 to over $200, depending on the hormones included and the pharmacy.

FDA-approved bioidentical options, by contrast, are often covered by standard insurance plans. Estradiol patches, gels, and micronized progesterone are available in generic forms at low cost with most insurance. Even without insurance, generic estradiol patches or gel can be under $50 per month at standard pharmacies.

This cost difference matters because some women continue with expensive compounded preparations when equivalent regulated alternatives exist and would be more affordable. If cost is a barrier to treatment, it is worth asking explicitly whether a regulated product would meet your needs.

The higher cost of compounding does not make it more effective. It reflects the custom preparation labor and the fact that it bypasses the insurance system that negotiates prescription drug pricing. Expensive does not mean better in this context.

Disclaimer

This content is for informational purposes only and does not replace medical advice. Always consult your healthcare provider about your specific situation.

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Medical disclaimerThis content is for informational purposes only and does not constitute medical advice, diagnosis, or treatment. Always consult a qualified healthcare provider with questions about a medical condition. PeriPlan is not a substitute for professional medical advice. If you are experiencing severe or concerning symptoms, please contact your doctor or emergency services immediately.

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